Retrieves the effect on gene expression of a list of variants using the rsids
Parameters
| Name | Type | Description | Default | Example Values |
| id |
String List |
A list of rsid of the desired SNPs |
- |
rs11704416,rs9364554 |
Returns
| Name | Description |
| rsid |
rsid of the variant |
| gene |
Gene symbol of the associated gene |
| tissue |
Tissue where the associations if found |
| effect |
Slope of the linear model |
| pvalue |
P-value of the associations |
| padj |
Corrected p-value of the associations |
| model |
Model of the association (additive, dominant, recessive) |
Python Example
import requests
url = "https://bcglab.cibio.unitn.it/polympact/searchSNP/gene/%s/"
rsids = ["rs11704416", "rs9364554"]
rsids = ",".join(rsids)
req = requests.get(url % rsids)
if not req.ok:
req.raise_for_status()
exit()
print(req.json())